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LifeTein Modifications: Fluorophores list including absorption and emission peak values

Fluorophore
Absorption
Emission

1,5 IAEDANS

336
490
1,8-ANS
372
480
4-Methylumbelliferone
385
502
5-carboxy-2,7-dichlorofluorescein
504
529
5-Carboxyfluorescein (5-FAM)
492
518
5-Carboxynapthofluorescein (pH 10)
512/598
563/668
5-Carboxytetramethylrhodamine (5-TAMRA)
542
568
5-FAM (5-Carboxyfluorescein)
492
518
5-HAT (Hydroxy Tryptamine)
370-415
520-540
5-Hydroxy Tryptamine (HAT)
370-415
520-540
5-ROX (carboxy-X-rhodamine)
578
567
604
591
5-TAMRA (5-Carboxytetramethylrhodamine)
548
542
552
568
6-Carboxyrhodamine 6G
518
543
6-CR 6G
518
543
6-JOE
520
548
7-Amino-4-methylcoumarin
351
430
7-Aminoactinomycin D (7-AAD)
546
647
7-Hydroxy-4-methylcoumarin
360
449, 455
9-Amino-6-chloro-2-methoxyacridine
412, 430
471, 474
ABQ
344
445
Acid Fuchsin
540
630
ACMA (9-Amino-6-chloro-2-methoxyacridine)
412, 430
471, 474
Acridine Orange + DNA
502
526
Acridine Orange + RNA
460
650
Acridine Orange, both DNA & RNA
440-480
520-650
Acridine Red
455-600
560-680
Acridine Yellow
470
550
Acriflavin
436
520
Acriflavin Feulgen SITSA
355-425
460
Aequorin (Photoprotein)
466
AFPs - AutoFluorescent Protein - (Quantum Biotechnologies) see sgGFP, sgBFP
Alexa Fluor 350™
346
342
442
441
Alexa Fluor 430™
431
540
Alexa Fluor 488™
495, 492
519, 520
Alexa Fluor 532™
531, 532
553, 554
Alexa Fluor 546™
556, 557
572, 573
Alexa Fluor 568™
577, 578
603
Alexa Fluor 594™
590, 594
617, 618
Alexa Fluor 633™
632
650
Alexa Fluor 647™
647
666
Alexa Fluor 660™
668
698
Alexa Fluor 680™
679
702
Alizarin Complexon
530-560, 580
580, 624-645
Alizarin Red
530-560
580
Allophycocyanin (APC)
630, 645
655, 660
AMC, AMCA-S
345
445
AMCA (Aminomethylcoumarin)
345
347
425
444
AMCA-X
353
442
Aminoactinomycin D
555
655
Aminocoumarin
346
350
442
445
Aminomethylcoumarin (AMCA)
345
347
425
444
Anilin Blue
600
Anthrocyl stearate
360-381
446
APC (Allophycocyanin)
630, 645
655, 660
APC-Cy7
625-650
755
APTRA-BTC = Ratio Dye, Zn2+
466/380
520/530
APTS
424
505
Astrazon Brilliant Red 4G
500
585
Astrazon Orange R
470
540
Astrazon Red 6B
520
595
Astrazon Yellow 7 GLL
450
480
Atabrine
436
490
ATTO-TAG™ CBQCA
465
560
ATTO-TAG™ FQ
486
591
Auramine
460
550
Aurophosphine G
450
580
Aurophosphine
450-490
515
BAO 9 (Bisaminophenyloxadiazole)
365
395
BCECF (high pH)
492, 503
520,528
BCECF (low pH)
482
520
Berberine Sulphate
430
550
Beta Lactamase
409
447, 520
BFP blue shifted GFP (Y66H)
Blue Fluorescent Protein
381, 382, 383
445, 447, 448
BFP/GFP FRET
Bimane
398
490
Bisbenzamide
360
461
Bisbenzimide (Hoechst)
360
461
bis-BTC = Ratio Dye, Zn2+
455/405
529/505
Blancophor FFG
390
470
Blancophor SV
370
435
BOBO™ -1
462
481
BOBO™ -3
570
602
Bodipy 492/515
490
515
Bodipy 493/503
533
549
Bodipy 500/510
509
515
Bodipy 505/515
502
510
Bodipy 530/550
528
547
Bodipy 542/563
543
563
Bodipy 558/568
558
569
Bodipy 564/570
564
570
Bodipy 576/589
579
590
Bodipy 581/591
584
592
Bodipy 630/650-X
625
642
Bodipy 650/665-X
647
665
Bodipy 665/676
605
676
Bodipy Fl
504, 505
511, 513
Bodipy FL ATP
505
514
Bodipy Fl-Ceramide
505
511
Bodipy R6G SE
528
547
Bodipy TMR
542
574
Bodipy TMR-X conjugate
544
573
Bodipy TMR-X, SE
544
570
Bodipy TR
589
617
Bodipy TR ATP
591
620
Bodipy TR-X SE
588
616
BO-PRO™ -1
462
481
BO-PRO™ -3
544
570
Brilliant Sulphoflavin FF
430
520
BTC - Ratio Dye Ca2+
464/401
533/529
BTC-5N - atio Dye, Zn2+
459/417
517/532
Calcein
494
517
Calcein Blue
373
440
Calcium Crimson™
588, 589
611, 615
Calcium Green
501, 506
531
Calcium Green-1 Ca2+ Dye
506
531
Calcium Green-2 Ca2+
506/503
536
Calcium Green-5N Ca2+
506
532
Calcium Green-C18 Ca2+
509
530
Calcium Orange
549
575
576
Calcofluor White
385, 395, 405
437, 440, 445
Carboxy-X-rhodamine (5-ROX)
576
601
Cascade Blue™
377
398
399
420
423
Cascade Yellow
399
400
550
552
Catecholamine
410
470
CCF2 (GeneBlazer)
CFDA
494
520
CFP - Cyan Fluorescent Protein
430, 433, 436, (453)
474, 475, 476, (501)
CFP/YFP FRET
Chlorophyll
480
650
Chromomycin A
436-460
470
Chromomycin A
445
575
CL-NERF (Ratio Dye, pH)
504/514
540
CMFDA
494
520
Coelenterazine Ca2+ Dye, bioluminescence
(429)
465
Coelenterazine cp (Ca2+ Dye,)
(430)
442
Coelenterazine f
(437)
473
Coelenterazine fcp
452
Coelenterazine h
(437)
464
Coelenterazine hcp
(433)
444
Coelenterazine ip
441
Coelenterazine n
(431)
467
Coelenterazine O
460
575
Coumarin Phalloidin
387
470
C-phycocyanine
CPM Methylcoumarin
384
469
CTC
400-450
602
CTC Formazan
Cy2™
489
506
Cy3.1 8
554
568
Cy3.5™
581
598
Cy3™
514
552
554
566
570
Cy5.1 8
649
666
Cy5.5™
675
695
Cy5™
649
666
670
Cy7™
710, 743
767, 805
Cyan GFP
433 (453)
475 (501)
cyclic AMP Fluorosensor (FiCRhR)
500
517
CyQuant Cell Proliferation Assay
480
520
Dabcyl
453
Dansyl
340
578
Dansyl Amine
337
517
Dansyl Cadaverine
335
518
Dansyl Chloride
372
518
Dansyl DHPE
336
517
Dansyl fluoride
356
none
DAPI
359
461
Dapoxyl
403
580
Dapoxyl 2
374
574
Dapoxyl 3
373
574
DCFDA
504
529
DCFH (Dichlorodihydrofluorescein Diacetate)
505
535
DDAO
463
607
DHR (Dihydorhodamine 123)
505
534
Di-4-ANEPPS
496
705
Di-8-ANEPPS (non-ratio)
488
498
605
713
DiA (4-Di-16-ASP)
456
591
Dichlorodihydrofluorescein Diacetate (DCFH)
505
535
DiD - Lipophilic Tracer
644
665
DiD (DiIC18(5))
644
665
DIDS
341
415
Dihydorhodamine 123 (DHR)
505
535
DiI (DiIC18(3))
549, 551
565
Dinitrophenol
349
DiO (DiOC18(3))
484, 487
501, 502
DiR
748
780
DiR (DiIC18(7))
750
779
DM-NERF (high pH)
497/510
540
DNP
349
Dopamine
340
490-520
DsRed
558
583
DTAF
494
520
DY-630-NHS
621
660
DY-635-NHS
634
664
EBFP
383
447
ECFP
436
474
EGFP
488, 498
507, 516
ELF 97
345
530
Eosin
524
545
Erythrosin
529, 532
554, 555
Erythrosin ITC
529
555
Ethidium Bromide
510, 523
595, 605
Ethidium homodimer -1 (EthD-1)
528
617
Euchrysin
430
540
EukoLight
Europium (III) chloride
EYFP
513, 520
527, 532
Fast Blue
360
440
FDA
494
520
Feulgen (Pararosaniline)
570
625
FIF (Formaldehyd Induced Fluorescence)
405
433
FITC
490, 494
520, 525
FITC Antibody
493
517
Flazo Orange
375-530
612
Fluo-3
480 – 506, 506
520, 527
Fluo-4
494
516
Fluorescein (FITC)
490, 494
520, 525
Fluorescein Diacetate
494
520
Fluoro-Emerald
495
524
Fluoro-Gold (Hydroxystilbamidine)
361
536
Fluor-Ruby
555
582
FluorX
494
520
FM 1-43™
479
598
FM 4-46
515
640
Fura Red™ (high pH)
572
657
Fura Red™/Fluo-3
Fura-2, high calcium
335
505
Fura-2, low calcium
363
512
Fura-2/BCECF
Genacryl Brilliant Red B
520
590
Genacryl Brilliant Yellow 10GF
430
485
Genacryl Pink 3G
470
583
Genacryl Yellow 5GF
430
475
GeneBlazer (CCF2)
GFP (S65T)
498
516
GFP red shifted (rsGFP)
498
516
GFP wild type, non-UV excitation (wtGFP)
475
509
GFP wild type, UV excitation (wtGFP)
395
509
GFPuv
385
508
Gloxalic Acid
405
460
Granular Blue
355
425
Haematoporphyrin
530-560
580